@Article{IJNAM-9-326,
author = {J. Xie, W. Zhang, S. Zhang and T. Wen},
title = {A Parallel Method for Querying Target Subnetwork in a Biomolecular Network},
journal = {International Journal of Numerical Analysis and Modeling},
year = {2012},
volume = {9},
number = {2},
pages = {326--337},
abstract = {<p style="text-align: justify;">Similarity analysis of biomolecular networks among different species or within one
species is an efficient approach to understand evolution or disease. The more data from biological
experiment, the larger networks. Sequential computational limitation on single PC or workstation
have to be considered when methods are developed. The Immediate Neighbors-in-first Method is a
method for querying the subnetwork which is most similar to the target in a biomolecular network.
Parallel algorithm for it to treat large-scale networks is developed and the parallel performance
is evaluated in this paper. Moreover, we apply the present method to two groups of tests on real
biological data including protein interaction networks of Fly and Yeast and metabolic networks of
Yeast and E. coli. Several conserved protein interactions and metabolic pathways are found and
some new protein interactions and functions are predicted.</p>},
issn = {2617-8710},
doi = {https://doi.org/},
url = {http://global-sci.org/intro/article_detail/ijnam/631.html}
}